Download file: WBSCR genes intron-exon junctions

Supplementary information: WBSCR genes intron-exon junctions
                 
murine WBSCR16 intron-exon junctions on MC5
human WBSCR20A intron-exon junctions on HC7
               
Acceptor Exon Size Donor Acceptor Exon Size Donor
    [bp]       [bp]  
  1 >=367 ATAAGgtggg        
ttcagATTTC 2 130 TAAAAgtaag   1 =109 TCCAGgtagc
tccagCCAGG 3 129 AGGTGgtaag cacagAACGT 2 123 CCAAGgtgag
ttcagTCTTC 4 67 TACAGgtgag cccagGTGCT 3 175 TCCAGgtaag
tgtagCGAGA 5 52 TCCAGgtaag cgtagCCTCC 4 109 TCCAGgtgag
gccagGTTGT 6 85 GACAGgtagg ggcagCCTCG 5 139 ACAGGgtagg
gctagGCCTG 7 182 CACAGgtggg gccagGCCAG 6 116 CAAGGgtgag
tgcagGTGAA 8 88 GAACGgtaag cctagGAAGA 7 179 CTCGGgtgag
cacagCGGAG 9 174 CACCAgtaag cttagGTATG 8 211 TTCAGgtaca
tgcagACAAG 10 86 GGAGGgtaag tgcagGCTAG 9 141 CCAAGgtgag
tccagGTGAC 11 =931   tctagCTCAG 10 =300  
               
human WBSCR17 intron-exon junctions on HC7
human WBSCR20B intron-exon junctions on HC7
               
Acceptor Exon Size Donor Acceptor Exon Size Donor
    [bp]       [bp]  
               
  1 =238 GAATGgtaag   1 =124 CAAGGgtagg
tctagGCTTA 2 184 ACCAAgtaag cccagGTGCT 2 167 TCCAGgtgag
cccagGTGTA 3 167 CGAAGgtaca cctagCCTCC 3 105 TCCAGgtgag
tgcagAGGAG 4 175 GGCTGgtagg cccagGCTGG 4 144 ATCAGgtggg
ttcagGGCTG 5 198 ATCAGgtctg ggcagCCTTG 5 139 ACAGGgtagg
ctcagGACCC 6 118 TCAAGgtttg gccagGCCAG 6 115 CAAGGgtgag
cctagGTATG 7 186 TGGAGgtagg cctagGAAGA 7 187 AGATGgtgag
ttcagAATCC 8 138 GGGAGgtaat cttagGTATG 8 211 TTCAGgtaca
tgcagCTTCG 9 96 CACAGgtagg tgcagGCTAG 9 141 CCGACgtgag
gacagCTTGC 10 168 TCCAGgtgag tctagCTCAG 10 =301  
cccagAATGG 11 =1630          
               
human WBSCR21 intron-exon junctions on HC7
human WBSCR20C intron-exon junctions on HC7
               
Acceptor Exon Size Donor Acceptor Exon Size Donor
    [bp]       [bp]  
               
  1 =207 CCGAGgtcag   1 =96 TCCAGgtagc
gccagGCCGC 2A 136 GTAGGgtgag cacagAACGT 2 121 CAAGGgtggc
gccagGCCGC 2B 131 AGGCCgtagg cccagGTGCT 3 167 TCCAGgtgag
tacagGCTTC 2C 115 GTAGGgtgag cctagCCTCC 4 105 TCCAGgtgag
cccagGTGCT 3A 174 AGAGGgtgag cccagGCTGG 5 144 ATCAGgtggg
actagGGATG 3B =622   ggcagCCTCG 6 139 ACAGGgtagg
cccagGTGCT 3C 84 TGCAGgacct gccagGCCAG 7 116 CAAGGgtgag
cacagCCAGA 4 171 TCCAGgtgat cctagGAAGA 8 179 CTCGGgtgag
cacagGACAT 5 182 GTGCAgtaag cttagGTATG 9 50 GCCCGgtgcg
cacagTCCCA 6A =624   tgcagCGGCT 10 89 TTCAGgtaca
tgcagCCTGC 6B =136   tgcagGCTAG 11 141 CCGACgtgag
        tctagCTCAG 12 =303  
 
murine WBSCR21 intron-exon junctions on MC5   murine WBSCR20 intron-exon junctions on MC5
                 
Acceptor Exon Size Donor   Acceptor Exon Size Donor
    [bp]         [bp]  
                 
  1 541 CTGAGgtcag     1 =117 TCCAGgtagt
tccagGCCGC 2 136 GGAGGgtgag   cacagAACCT 2 123 CCAAGgtgag
cgcagGTGCT 3 174 AGAGGgtaag   tccagGTGCT 3 175 CCAAGgtgac
cccagCCAGA 4 171 TCAAGgtgac   tctagCCTAC 4 109 TCCAGgtaag
cacagGAAGC 5 182 GTACAgtaag   gccagCCTGG 5 139 ACAAGgtagg
gccagACCCA 6 =282     gctagGCCAG 6 116 CAGGGgtgag
          cctagGAAGA 7 179 CTCTGgtgag
          cacagGCATG 8 211 TTCAGgtagt
          cacagGTTGG 9 144 CCAACgtgag
          tccagCCCAG 10 =267  
 
human WBSCR22 intron-exon junctions on HC7
 
murine WBSCR22 intron-exon junctions on MC5
                 
Acceptor Exon Size Donor   Acceptor Exon Size Donor
    [bp]         [bp]  
                 
  1 =106 AGCTGgtaag     1 =77 AGCTGgtgag
cgcagTTTTA 2 38 CGCAAgtgag   aacagTTTTA 2 38 CGCAAgtgag
accagCTCAC 3 96 ATTGGgtgag   cccagCTCAC 3 96 ATTGGgtgag
tccagCTGTG 4 83 GCTGGgtaag   ttcagCTGCG 4 83 GTTGGgtaag
tgtagATGAG 5 97 ATCAGgtgag   tgtagATGCC 5 97 ATCAGgtgac
tttagCATTT 6 97 TTCTCgtgag   ttcagCATCT 6 97 CCCTTgtgag
ttcagGTCCG 7 51 AGCAGgtgag   cacagGTCCG 7 51 AGCAGgtgag
ctcagTTGGA 8 86 AAGAAgtgag   tccagCTGGA 8 86 AAGAAgtaag
ttcagATTCT 9 46 CAGAGgtgag   ttcagGTTCT 9 46 CAAAGgtaag
tgcagGGGCT 10 59 GAGAGgtaaa   tgcagGGGCT 10 59 GAGCGgtaag
cacagGTTCC 11 90 GGCAGgtgag   gccagGGCCC 11 90 GGCAAgtgag
cacagGGAAG 12 =325     tgcagGGAGG 12 =466  
                 
abbreviations: HC7, human chromosome 7; MC5, mouse chromosome 5